• 综述与评论 •
李慧, 樊建芬, 宋学增, 刘东颜, 李睿, 陈素芳. 电场环境下纳米通道内水分子传输行为的MD模拟研究[J]. 化学进展, 2013, 25(10): 1642-1647.
Li Hui, Fan Jianfen, Song Xuezeng, Liu Dongyan, Li Rui, Chen Sufang. MD Simulations of the Water Transportation in Nanochannels under the Environments of Electric Fields[J]. Progress in Chemistry, 2013, 25(10): 1642-1647.
纳米通道内的水分子传输是近年来分子动力学(MD)模拟研究的热点之一。本文综述了电场对纳米通道中水分子传输行为影响的研究成果,主要介绍了三种施加电场的方法:在通道附近加电荷、在通道两侧的水相中加离子或带电荷的氨基酸以及对纳米通道直接施加电场。并报道了各类电场对纳米通道内水的填充平衡及相变行为、水分子偶极取向、水流量、水扩散速率等产生的影响,以及加电场的各种相关应用,如水流开关、信号传输、水泵及存储器等。最后,剖析了电场环境下MD模拟研究中尚待解决的问题。
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[1] Denker B M, Smith B L, Kuhajda F P, Agre P. J. Biol. Chem., 1988, 263(30): 15634—15642 [2] Preston G M, Agre P. Proc. Natl. Acad. Sci. U. S. A., 1991, 88(24): 11110—11114 [3] Zeidel M L, Ambudkar S V, Smith B L, Agre P. Biochemistry, 1992, 31(33): 7436—7440 [4] Murata K, Mitsuoka K, Hirai T, Walz T, Agre P, Heymann J B, Engel A, Fujiyoshi Y. Nature, 2000, 407(6804): 599—605 [5] Agre P. Angew. Chem. Int. Ed., 2004, 43(33): 4278—4290 [6] De Groot B L, Grubmüller H. Science, 2001, 294(5550): 2353—2357 [7] Tajkhorshid E, Nollert P, Jensen M Ø, Miercke L J W, O'Connell J, Stroud R M, Schulten K. Science, 2002, 296(5567): 525—530 [8] Jensen M Ø, Tajkhorshid E, Schulten K. Biophys. J., 2003, 85(5): 2884—2899 [9] Hub J S, Aponte-Santamaria C, Grubmüller H, De Groot B L. Biophys. J., 2010, 99(12): 97—99 [10] Raghunathan A V, Aluru N R. Phys. Rev. Lett., 2006, 97(2): art. no. 024501 [11] Wan R Z, Li J Y, Lu H J, Fang H P. J. Am. Chem. Soc., 2005, 127(19): 7166—7170 [12] Service R F. Science, 2006, 313(5790): 1088—1090 [13] Majumder M, Chopra N, Andrews R, Hinds B. Nature, 2005, 438(44): 930 [14] Holt J K, Park H G, Wang Y M, Stadermann M, Artyukhin A B, Grigoropoulos C P, Noy A, Bakajin O. Science, 2006, 312: 1034—1037 [15] Ghosh S, Sood A K, Kumar N. Science, 2003, 299(5609): 1042—1044 [16] Kumar M, Grzelakowski M, Zilles J, Clark M, Meier W. Proc. Natl. Acad. Sci. U. S. A., 2007, 104(52): 20719—20724 [17] Gong X J, Li J Y, Lu H J, Wan R Z, Li J C, Hu J, Fang H P. Nanotechnol., 2007, 2: 709—712 [18] Tu Y S, Zhou R Z, Fang H P. Nanoscale, 2010, 2: 1976—1983 [19] Li J Y, Gong X J, Lu H J, Li D, Fang H P, Zhou R Z. PNAS, 2007, 104(10): 3687—3692 [20] Zhu F Q, Schulten K. Biophys. J., 2003, 85(1): 236—244 [21] Zhu F Q, Tajkhorshid E, Schulten K. Phys. Rev. Lett., 2004, 93: art. no. 224501 [22] Thomas J A, McGaughey A J H. Phys. Rev. Lett., 2009, 102(18): art. no. 184502 [23] Kalra A, Garde S, Hummer G. PNAS, 2003, 100(18): 10175—10180 [24] Hummer G, Rasalash J C, Noworyta J P. Nature, 2001, 414: 188—190 [25] Gong X J, Fang H P. Chinese Phys. B, 2008, 17(7): 2739—2744 [26] Wan R Z, Hu J, Fang H P. Sci. China-Phys. Mech. Astron., 2012, 55(5): 751—756 [27] Hinds B. Nanotechnol., 2007, 2: 673—674 [28] Wang Y, Zhao Y J, Huang J P. Chin. Phys. B, 2012, 21(7): art. no. 076102 [29] Liu L, Qiao Y, Chen X. Appl. Phys. Lett., 2008, 92(10): art. no. 101927 [30] Huang B D, Xia Y Y, Zhao M W, Li F, Liu X D, Ji Y J, Song C. J. Chem. Phys., 2005, 122: art. no. 084708 [31] Jorge S Q, Markus P I, Ghadiri M R. J. Am. Chem. Soc., 2002, 124: 10004—10005 [32] Zhang Z Q, Ye H F, Liu Z, Ding J N, Cheng G G, Ling Z Y, Zheng Y G, Wang L, Wang J B. J. Appl. Phys., 2012, 111: art. no. 114304 [33] Dzubiella J, Hansen J P. J. Chem. Phys., 2005, 122: art. no. 234706 [34] Dzubiella J, Allen R J, Hansen J P. J. Chem. Phys., 2004, 120(11): 5001—5004 [35] Suk M E, AluruN R. Phys. Chem. Chem. Phys., 2009, 11: 8614—8619 [36] Garate J A, English N J, MacElroy J M D. J. Chem. Phys., 2009, 131: art. no. 114508 [37] English N J, Garate J A, MacElroy J M D. Carbon Nanotubes-Growth and Applications. InTech, 2011. 299—324 [38] English N J, MacElroy J M D. J. Chem. Phys., 2003, 119: 11806—11813 [39] Sigalov G, Comer J, Timp G, Aksimentiev A. Nano Lett., 2008, 8: 56—63 [40] Xu D, Phillips J C, Schulten K. J. Phys. Chem., 1996, 100(29): 12108—12121 [41] Garate J A, English N J, MacElroy J M D. Molec. Sim., 2009, 35: 3—12 [42] Wan R Z, Lu H J, Li J Y, Bao J D, Hu J, Fang H P. Phys. Chem. Chem. Phys., 2009, 11: 9898—9902 [43] Su J Y, Guo H X. ACS Nano, 2011, 5(1): 351—359 [44] Fu Z M, Luo Y, Ma J P, Wei G H. J. Chem. Phys., 2011, 134(15): art. no. 154507 [45] Wang Y, Zhao Y J, Huang J P. J. Phys. Chem. B, 2011, 115(45): 13275—13279 [46] Figueras L, Faraudo J. Tuning Water Transport in Carbon Nanotubes with A Strong Perpendicular Electricfield. (2011-06-03). .http: //www. ffn. ub. es/fises11/sites/default/files/PDF/figueras_la_peruta_luis_alfonso. pdf [47] Figueras L, Faraudo J. Molec. Sim., 2012, 38(1): 23—25 [48] Crozier P S, Rowley R L, Holladay N B, Henderson D, Busath D D. Phys. Rev. Lett., 2001, 86(11): 2467—2470 [49] Chung S H, Allen T W, Kuyucak S. Biophys. J., 2002, 83(1): 263—277 [50] Waghe A, Rasaiah J C, Hummer G. J. Chem. Phys., 2002, 117: 10789—10795 [51] Vaitheeswaran S, Rasaiah J C, Hummer G. J. Chem. Phys., 2004, 121(16): 7955—7965 [52] Zuo G C, Shen R, Ma S J, Guo W L. J. Am. Chem. Soc., 2010, 4(1): 205—210 [53] Fang H P, Wan R Z, Gong X J, Lu H J, Li S Y. J. Phys. D: Appl. Phys., 2008, 41: art. no. 103002 [54] Zimmerli U, Gonnet P G, Walther J H, Koumoutsakos P. Nano Lett., 2005, 5(6): 1017—1022 [55] Podeszwa R, Buch V. Phys. Rev. Lett., 1999, 83(22): 4570—4573 [56] Dellago C, Naor M M, Hummer G. Phys. Rev. Lett., 2003, 90: art. no. 105902 [57] Zhu F Q, Tajkhorshid E, Schulten K. Phys. Rev. Lett., 2004, 93(22): art. no. 224501 [58] Liu B, Li X Y, Li B L, Xu B Q, Zhao Y L. Nano Lett., 2009, 9(4): 1386—1394 [59] Joseph S, Aluru N R. Phys. Rev. Lett., 2008, 101(6): art. no. 064502 [60] Berezhkovskii A, Hummer G. Phys. Rev. Lett., 2002, 89(6): art. no. 064503 [61] Liu J, Fan J F, Tang M, Cen M, Yan J F, Liu Z, Zhou W Q. J. Phys. Chem. B, 2010, 114: 12183—12192 [62] Tajkhorshid E, Zhu F Q, Schulten K. Handbook of Materials Modeling. Netherlands: Springer-Verlag, 2005. 1797—1822 [63] Portella G, Pohl P, de Groot B L. Biophys. J., 2007, 92(11): 3930—3937 [64] Portella G, de Groot B L. Biophys. J., 2009, 96(3): 925—938 [65] Jirasak W E, Markus S M, Cristiano D, Mikko K. Nanotechnol., 2010, 5: 555—557 [66] Bonthuis D J, Rinne K F, Falk K, Nadir K C, Horinek D, Nihat B A, Bocquet L, Netz R R. J. Phys.: Condens. Matter, 2011, 23: art. no. 184110 [67] Engels M, Bashford D, Ghadiri M R. J. Am. Chem. Soc., 1995, 117: 9151—9158 [68] 唐敏(Tang M), 樊建芬(Fan J F), 刘健(Liu J), 何梁君(He L J), 何珂(He K). 化学进展(Progress in Chemistry), 2010, 22(4): 648—652 [69] Gopalan P, Ponmalai K. J. Mol. Model, 2008, 14: 1147—1157 [70] Liu J, Fan J F, Tang M, Zhou W Q. J. Phys. Chem. A, 2010, 114: 2376—2383 [71] Cambre S, Schoeters B, Luyckx S, Goovaerts E, Wenseleers W. Phys. Rev. Lett., 2009, 104: art. no. 207401 [72] Qiao Y, Liu L, Chen X. Nano Lett., 2009, 9(3): 984—988 |
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